yloC [2019-02-19 20:12:30]

unknown

locus: BSU15660

pI: 4.87

mw: 33.48 kDa

protein length: 291 aa

gene length: 876 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 1,640,720 1,641,595

The protein

Protein family

• UPF0701 family (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]-[gene|6AF1CB8998BE9C71DF4F1201A7F74FF7E75CB799|remA]-[gene|1BC994DE60A7BB35DEDD7154581A396D29AA94A7|gmk]-[gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]

  description

  • [pubmed|22383849]

  sigma factors

  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [Pubmed|23396918], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]

  regulation

  • expressed during vegetative growth and early during sporulation in the forespore ([protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]) [Pubmed|23396918]

• genes: [gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]-[gene|6AF1CB8998BE9C71DF4F1201A7F74FF7E75CB799|remA]-[gene|1BC994DE60A7BB35DEDD7154581A396D29AA94A7|gmk]-[gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]-[gene|2B67C63442F28F6BCBA3BA6DE4B563C73E8DF16C|yloI]-[gene|AF5ADDA2A98EC18BB72A81AA0336E639C0D1F430|priA]-[gene|3D41FB608DB70B9482312A1BBCCDBDA7FB713AFA|defA]-[gene|06971E9AAB033E2878914A76645F99E97CE8A90A|fmt]-[gene|1370D8783450D538C71E3DE8EA5B37DFEE073FF0|yloM]-[gene|5DEBD84E5937DB8B7F29C729FAA0076DF86A5451|yloN]

  description

  • [pubmed|22383849]

• genes: [gene|7821A09DADC6EAF589A882F05CC34BE900E06F2A|yloB]-[gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]-[gene|6AF1CB8998BE9C71DF4F1201A7F74FF7E75CB799|remA]-[gene|1BC994DE60A7BB35DEDD7154581A396D29AA94A7|gmk]-[gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]

  description

  • [pubmed|22383849]

  regulation

  • expressed during sporulation in the mother cell [pubmed|12161109]

Biological materials

Mutant

• GP2609 ([gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]::''cat''), available in [SW|Jrg Stlke]'s lab
• MGNA-B131 (yloC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1130 NBRP B. subtilis, Japan]
• BKE15660 ([gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE15660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTAAAACACCCAATTC, downstream forward: _UP4_TAGTGACTGTGCGTATTGTT
• BKK15660 ([gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK15660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTAAAACACCCAATTC, downstream forward: _UP4_TAGTGACTGTGCGTATTGTT