SubtiBank SubtiBank
ydcI [2018-12-03 16:59:14]
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ydcI [2018-12-03 16:59:14]

unknown
Locus
BSU04780
Isoelectric point
6.77
Molecular weight
81.23 kDa
Protein length
719 aa Sequence Blast
Gene length
2157 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Information processing → RNA synthesis and degradation → RNase/ based on similarity
  • Groups of genes → Phosphoproteins → Phosphorylation on an Arg residue

    • Gene

    Coordinates
    525,743 → 527,902

    The protein

    Domains

  • S1 domain (aa 646 ... 718) (according to the Interpro database)

    • Modification

  • phosphorylated on Arg-473 PubMed

    • Structure

  • 2OCE (the protein from Pseudomonas aeruginosa, 43% identity)

    • Expression and Regulation

    Operons

    Genes
    ydcI
    Description
    PubMed
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    Biological materials

    Mutant

  • MGNA-C101 (ydcI::erm), available at the NBRP B. subtilis, Japan
  • BKE04780 (ΔydcI::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTAACCAAAGCCTCCAA, downstream forward: _UP4_TAAAAGCACTGCTTACGAGC
  • BKK04780 (ΔydcI::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTAACCAAAGCCTCCAA, downstream forward: _UP4_TAAAAGCACTGCTTACGAGC

    • References

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