yydJ

ABC transporter, permease, export of the mature YydF epipeptide

Locus: BSU_40140

Isoelectric point: 9.47

Molecular weight: 27.36 kDa

Protein length: 240 aa

Gene length: 723 bp

Function: control of LiaR-LiaS activity

Product: ABC transporter, permease

Essential: no

Synonyms

Genomic Context

Loading

Categories containing this gene/protein

• Cellular processes → Transporters → ABC transporters → Exporters → Export of peptides
• Metabolism → Additional metabolic pathways → Miscellaneous metabolic pathways → Biosynthesis of antibacterial compounds
• Information processing → Regulation of gene expression → Transcription factors and their control → Control of two-component response regulators → Control of response regulators/ other
• Lifestyles → Coping with stress → Biosynthesis of antibacterial compounds
• Groups of genes → Membrane proteins

Gene

Coordinates: 4,124,220 4,124,942

The protein

Localization

• cell membrane PubMed

Expression and Regulation

Operons

• Genes: yydF-yydG-yydH-yydI-yydJ
  Description: PubMed

  Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon

  Regulatory mechanism

  • AbrB: repression, PubMed, in AbrB regulon
  • Rok: repression, PubMed, in Rok regulon

  Regulation

  • activated after transition to stationary phase(AbrB) PubMed

Biological materials

Mutant

• MGNA-B807 (yydJ::erm), available at the NBRP B. subtilis, Japan
• BKE40140 (yydJ::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCTCAAGCCCCCACTGTT, downstream forward: _UP4_TAATAAAGGGAGCTACTTCA
• BKK40140 (yydJ::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCTCAAGCCCCCACTGTT, downstream forward: _UP4_TAATAAAGGGAGCTACTTCA

References

Reviews

Loading

Original publications

Loading