SubtiBank SubtiBank
ydeE
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ydeE

similar to transcription factor (AraC family)
Locus
BSU_05170
Isoelectric point
7.22
Molecular weight
33.10 kDa
Protein length
290 aa Sequence Blast
Gene length
873 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms

Genomic Context

      
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Categories containing this gene/protein

Gene

Coordinates
563,614 564,486

The protein

Protein family

Domains

  • HTH araC/xylS-type domain (aa 8-106) (according to UniProt)
  • Structure

  • 1XS9 (from E. coli, N-terminal HTH araC/xylS-type domain, 33% identity) PubMed
  • Localization

  • cytoplasm (according to Swiss-Prot)
  • Biological materials

    Mutant

  • MGNA-C081 (ydeE::erm), available at the NBRP B. subtilis, Japan
  • BKE05170 (ydeE::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTATTTGGCCTCCTTTA, downstream forward: _UP4_TAATACGTTTTTCAATCAGA
  • BKK05170 (ydeE::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTATTTGGCCTCCTTTA, downstream forward: _UP4_TAATACGTTTTTCAATCAGA
  • References

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