SubtiBank SubtiBank
yrzB [2019-03-01 19:46:34]
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yrzB [2019-03-01 19:46:34]

unknown
locus
BSU27380
pI
3.32
mw
10.68 kDa
protein length
93 aa Sequence Blast
gene length
282 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,797,100 2,797,381

    The protein

    Protein family

  • UPF0473 family (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|C5457FEC46A1AFC6E5B1148B0E5F258B2C3197B2|reoM]-[gene|508FC7117B4CE7AF119B3830AE9DC113CB058039|yrrK]-[gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]
    description
    [pubmed|22383849]
    view in new tab

    genes
    [gene|8C5C7F9A585AE89D53EAF1DB3A9AB525B9E30B4A|alaS]-[gene|C5457FEC46A1AFC6E5B1148B0E5F258B2C3197B2|reoM]-[gene|508FC7117B4CE7AF119B3830AE9DC113CB058039|yrrK]-[gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]
    description
    [pubmed|22383849]

    regulatory mechanism

  • [regulon|T-box|T-box]: antitermination, in [regulon|T-box|T-box]

    • regulation

  • induced by alanine limitation ([regulon|T-box|T-box]) [Pubmed|19258532]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A855 (yrzB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/855 NBRP B. subtilis, Japan]
  • BKE27380 ([gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCTTCACCTCTGGCT, downstream forward: _UP4_TAAAACATCGCGCCAAACCA
  • BKK27380 ([gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCTTCACCTCTGGCT, downstream forward: _UP4_TAAAACATCGCGCCAAACCA