SubtiBank SubtiBank
yvdQ [2017-05-25 17:49:35]
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yvdQ [2017-05-25 17:49:35]

unknown
locus
BSU34510
pI
5.81
mw
18.44 kDa
protein length
170 aa Sequence Blast
gene length
510 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.2|Spore coat protein/ based on similarity]
  • [category|SW 6|Groups of genes] → [category|SW 6.11|Efp-dependent proteins]

    • Gene

    Coordinates
    3,542,179 → 3,542,691

    The protein

    Structure

  • [PDB|2RBD] (from B. halodurans, 57% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|A0392469FB5B36C030C003ECC0EC39F71BBC5CD0|yvdQ]
    description
    [Pubmed|16497325]

    sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|16497325], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]

    • regulation

  • expressed during sporulation in the forespore ([protein|search|SigG]) [Pubmed|16497325]

    • additional information

  • [protein|search|translation] is likely to require [protein|search|Efp] due to the presence of several consecutive proline residues [PubMed|23239624,23239623]
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    Biological materials

    Mutant

  • MGNA-B619 (yvdQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1618 NBRP B. subtilis, Japan]

    • References

  • 16497325