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rpsF [Mon May 16 2016 15:53:19 GMT+0200 (CEST)]
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rpsF [Mon May 16 2016 15:53:19 GMT+0200 (CEST)]

ribosomal protein
locus
BSU40910
pI
4.00
mw
10.00 kDa
function
translation
product
ribosomal protein S6 (BS9)
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.4|Ribosomal proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|translation], [SW|most abundant proteins]
  • This gene is a member of the following [SW|regulons]

  • [SW|ComK regulon], [SW|stringent response]
  • Gene

    Coordinates on the chromosome (coding sequence)
    4,199,445 -> 4,199,732

    The protein

    Protein family

  • [SW|ribosomal protein] S6P family (according to Swiss-Prot)
  • Structure

  • [PDB|3R3T] (from ''Bacillus anthracis'', 71% identity, 97% similarity)
  • [PDB|3J9W] (the [SW|ribosome]) [Pubmed|25903689]
  • [SW|Interactions]

  • [protein|search|RpsF]-[protein|search|RpsR], the heterodimer binds the structure in the ''[protein|search|rpsF]'' mRNA 5' UTR [Pubmed|24310371]
  • Expression and Regulation

    Operon

  • ''[protein|search|yyaF]-[protein|search|rpsF]-[protein|search|ssbA]-[protein|search|rpsR]'' [Pubmed|14762004]
  • ''[protein|search|rpsF]-[protein|search|ssbA]-[protein|search|rpsR]'' [Pubmed|24310371,22383849]
  • [SW|Sigma factor]

  • ''[protein|search|rpsF]'': [protein|search|SigA] [Pubmed|24310371]
  • Regulation

  • [protein|search|RelA] dependent downregulation (Class I) during stringent response [Pubmed|11948165]
  • [protein|search|ComK]: transcription activation [Pubmed|11948146]
  • References

  • 19653700,14762004,11948165,11948146,23002217,22383849,24310371,15378759,25903689