yyaQ

unknown

locus: BSU_40750

pI: 5.82

mw: 13.77 kDa

protein length: 118 aa

gene length: 357 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 4,186,092 4,186,448

The protein

Structure

• [PDB|2KFP] (from Pseudomonas syringae, 44% identity) [pubmed|22865330]

Expression and Regulation

Operons

• genes: [gene|9CDE4E596FF563B682E839F82B7CD96CE58FCA8D|yyaQ]
  description: [pubmed|29794222]
  regulation: the [SW|RNA switch] RNA is degraded by [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] [pubmed|29794222]

Biological materials

Mutant

• MGNA-B857 (yyaQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1856 NBRP B. subtilis, Japan]
• BKE40750 ([gene|9CDE4E596FF563B682E839F82B7CD96CE58FCA8D|yyaQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40750 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACTCAATCACTCCTTTA, downstream forward: _UP4_TGAAGATAAAGAGTGTTCCT
• BKK40750 ([gene|9CDE4E596FF563B682E839F82B7CD96CE58FCA8D|yyaQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40750 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACTCAATCACTCCTTTA, downstream forward: _UP4_TGAAGATAAAGAGTGTTCCT

References

• 20525796,22865330,29794222