yndB [2018-10-29 10:30:25]

may be involved in the stress response of B. subtilis to chalcone-like flavonoids released by plants due to a pathogen infection

locus: BSU17730

pI: 4.60

mw: 15.98 kDa

protein length: 144 aa

gene length: 432 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 1,906,272 → 1,906,706

The protein

Protein family

• AHA1 family (according to Swiss-Prot)

Structure

• [PDB|2KTE] [Pubmed|20818668]

Expression and Regulation

Operons

• genes: [gene|9A9F44B4624A2D151B532F092294605F61BEB858|yndB]
  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-B106 (yndB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1105 NBRP B. subtilis, Japan]
• BKE17730 (Δ[gene|9A9F44B4624A2D151B532F092294605F61BEB858|yndB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE17730 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCGTTTACCTCTTGAC, downstream forward: _UP4_TAAAAAAGAGAGAGGTATCT
• BKK17730 (Δ[gene|9A9F44B4624A2D151B532F092294605F61BEB858|yndB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK17730 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCGTTTACCTCTTGAC, downstream forward: _UP4_TAAAAAAGAGAGAGGTATCT

References

• 19888688,20818668,28160315