pelC [Tue Dec 13 2016 11:16:36 GMT+0100 (CET)]

pectate lyase C

locus: BSU34950

pI: 9.14

mw: 24.00 kDa

function: degradation of polygalacturonic acid

product: pectate lyase C

essential: no

ec: 4.2.2.2

synonyms: yvpA

Genomic Context

categories

• [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.27|Utilization of other polymeric carbohydrates]
• [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]

[SW|Categories] containing this gene/protein

• [SW|utilization of specific carbon sources]

Gene

Coordinates on the chromosome (coding sequence): 3,590,603 -> 3,591,268

The protein

Catalyzed reaction/ biological activity

• Eliminative cleavage of (1->4)-alpha-D-galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at their non-reducing ends (according to Swiss-Prot)

Protein family

• polysaccharide lyase 3 family (according to Swiss-Prot)

[SW|Localization]

• extracellular (signal peptide) [Pubmed|18957862]

References

• 18957862,16514142,20525796,24236123