yvaF

Uncharacterized HTH-type transcriptional regulator

locus: BSU_33580

pI: 4.70

mw: 21.85 kDa

protein length: 190 aa

gene length: 573 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates: 3,449,049 3,449,621

The protein

[SW|Domains]

• [SW|HTH tetR-type domain] (aa 1-58) (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|97CE9735931D02E6E780C955C9BE3A67E5C4C59A|yvaF]-[gene|230D790937DAFB82A04B8597699115E1C1EAE98E|yvaE]-[gene|B7FBC30B744D8B1F26AFC5DCB297FAFAB5C60FB7|yvaD]
  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-A446 (yvaF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/446 NBRP B. subtilis, Japan]
• BKE33580 ([gene|97CE9735931D02E6E780C955C9BE3A67E5C4C59A|yvaF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33580 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTAATCCCCCGCTTTC, downstream forward: _UP4_GCTGATGAGGAGGCTGATGC
• BKK33580 ([gene|97CE9735931D02E6E780C955C9BE3A67E5C4C59A|yvaF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33580 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTAATCCCCCGCTTTC, downstream forward: _UP4_GCTGATGAGGAGGCTGATGC