yoxC

general stress protein, survival of ethanol stress

locus: BSU_18510

pI: 10.02

mw: 11.25 kDa

protein length: 101 aa

gene length: 306 bp

function: survival of ethanol stress

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]

Gene

Coordinates: 2,019,421 2,019,726

The protein

Protein family

• short-chain dehydrogenases/reductases (SDR) family (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|928CD0278328BB8642F7D560E42C13D74B4F1341|yoxC]-[gene|8C5ECDA04FA75F6FFA8625431AAC6855D8A1DB08|yoxB]-[gene|4A8360E50ADBA4CC859A64A72EBC0A07F70A1764|yoaA]
  description: [Pubmed|10482513]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|10482513,15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

  regulation

  • induced by stress ([protein|search|SigB]) [Pubmed|10482513,15805528]

Biological materials

Mutant

• MGNA-A830 (yoxC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/830 NBRP B. subtilis, Japan]
• BKE18510 ([gene|928CD0278328BB8642F7D560E42C13D74B4F1341|yoxC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18510 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATGTTCACTCCTTTTCT, downstream forward: _UP4_TAAGGATGAATGAGATCCCG
• BKK18510 ([gene|928CD0278328BB8642F7D560E42C13D74B4F1341|yoxC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18510 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATGTTCACTCCTTTTCT, downstream forward: _UP4_TAAGGATGAATGAGATCCCG

References

• 15805528,10482513