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ssuC [2018-09-04 19:23:28]
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ssuC [2018-09-04 19:23:28]

aliphatic sulfonate ABC transporter (permease)
locus
BSU08850
pI
10.48
mw
30.09 kDa
protein length
276 aa Sequence Blast
gene length
828 bp Sequence Blast
function
sulfonate uptake
product
aliphatic sulfonate ABC transporter (permease)
essential
no
synonyms
ygaM, yzeB

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.1|Importers] → [category|SW 1.2.1.1.6|Uptake of ions]
  • [category|SW 2|Metabolism] → [category|SW 2.6|Additional metabolic pathways] → [category|SW 2.6.4|Sulfur metabolism]
  • [category|SW 2|Metabolism] → [category|SW 2.6|Additional metabolic pathways] → [category|SW 2.6.4|Sulfur metabolism] → [category|SW 2.6.4.2|sulfur metabolism/ general]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • Gene

    Coordinates
    963,174 → 964,004

    The protein

    Protein family

  • ABC transmembrane type-1 domain (according to Swiss-Prot)
  • [SW|Localization]

  • cell membrane [Pubmed|10092453]
  • Expression and Regulation

    Operons

    genes
    [gene|675CE0BCA393E9C2795032F1C0FDE6AF08B77033|ssuB]-[gene|B47C64731FCAA086CA563EEE95D3205428E51EFC|ssuA]-[gene|91EAC386AD3A373E7CDE0265AA23786ADC55558A|ssuC]-[gene|A9F7BEC330EB17CA38C4D421E8BBF58CE380559C|ssuD]-[gene|93F7A5795A423CD8DD7B070F7F37731A5E8D6321|ygaN]
    description
    [Pubmed|11251850]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|11251850], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]
  • regulatory mechanism

  • [protein|50930C56C27D22715620A350220E3C56ADB41020|CymR]: repression, [Pubmed|16513748], in [regulon|50930C56C27D22715620A350220E3C56ADB41020|CymR regulon]
  • regulation

  • repressed in the presence of cysteine ([protein|search|CymR]) [Pubmed|16513748]
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    Biological materials

    Mutant

  • MGNA-A247 (ygaM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/247 NBRP B. subtilis, Japan]
  • 1A800 ( ''ssuC''::''kan''), [Pubmed|9782504], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A800&Search=1A800 BGSC]
  • BKE08850 (Δ[gene|91EAC386AD3A373E7CDE0265AA23786ADC55558A|ssuC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08850 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGAGCCCGCAGCCTCTGCTT, downstream forward: _UP4_TAAAAGATATAAAGGGGAGA
  • BKK08850 (Δ[gene|91EAC386AD3A373E7CDE0265AA23786ADC55558A|ssuC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08850 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGAGCCCGCAGCCTCTGCTT, downstream forward: _UP4_TAAAAGATATAAAGGGGAGA
  • References

  • 15937167,9782504,10092453,11251850,16513748