SubtiBank SubtiBank
ytnM [Tue Dec 13 2016 11:16:35 GMT+0100 (CET)]
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ytnM [Tue Dec 13 2016 11:16:35 GMT+0100 (CET)]

unknown
locus
BSU29280
pI
10.15
mw
31.00 kDa
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.12|Other transporters]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • [SW|Categories] containing this gene/protein

  • [SW|membrane proteins], [SW|proteins of unknown function]

    • This gene is a member of the following [SW|regulons]

  • [SW|CymR regulon], [SW|AscR regulon]

    • Gene

    Coordinates on the chromosome (coding sequence)
    2,998,796 -> 2,999,698

    The protein

    [SW|Localization]

  • membrane (Heterogeneous) [Pubmed|16479537]

    • Expression and Regulation

    Operon

  • ''[protein|search|snaA]-[protein|search|tcyJ]-[protein|search|tcyK]-[protein|search|tcyL]-[protein|search|tcyM]-[protein|search|tcyN]-[protein|search|cmoO]-[protein|search|cmoI]-[protein|search|cmoJ]-[protein|search|ribR]-[protein|search|sndA]-[protein|search|ytnM]'' [Pubmed|15668000]

    • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|15272571]

    • Regulation

  • repressed in the presence of cysteine ([protein|search|CymR]) [Pubmed|16109943]
  • induced in the presence of S-methyl-cysteine ([protein|search|AscR]) [Pubmed|23944997]

    • Regulatory mechanism

  • [protein|search|CymR]: transcription repression [Pubmed|16109943]
  • [protein|search|AscR]: transcription activation [Pubmed|16109943]

    • References

  • 16109943,15668000,16479537,23944997