yonS [2018-11-19 18:28:23]

prophage SP beta lipoprotein

locus: BSU21010

pI: 4.22

mw: 22.11 kDa

protein length: 203 aa

gene length: 609 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 2,220,335 → 2,220,946

The protein

Protein family

• pantothenate synthetase family (according to Swiss-Prot)

[SW|Localization]

• cell membrane (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|71012848B12CB7BCDEEACDAC6AD1966A971F8FAB|yonR]-[gene|8FAC496D7A28DA74A7F866AF24C842F733EE20BE|yonS]
  description: [Pubmed|29794222]

  regulation

  • the mRNA is processed between [gene|71012848B12CB7BCDEEACDAC6AD1966A971F8FAB|yonR] and [gene|8FAC496D7A28DA74A7F866AF24C842F733EE20BE|yonS] by [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y], this requires the [protein|EE52DFA35B935E551871D079A9BE877DB2001A3B|YmcA]-[protein|6C9A092F38739A3759793EF8B496569CD02C2E3F|YlbF]-[protein|EBD15C174A03B7FCDFFE4C5DB5D86E93F1B9CAC4|YaaT] complex [Pubmed|29794222]

Biological materials

Mutant

• BKE21010 (Δ[gene|8FAC496D7A28DA74A7F866AF24C842F733EE20BE|yonS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21010 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCCCCTTTTTACTCCA, downstream forward: _UP4_TAAAAACAAGCCCTATTTTG
• BKK21010 (Δ[gene|8FAC496D7A28DA74A7F866AF24C842F733EE20BE|yonS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21010 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCCCCTTTTTACTCCA, downstream forward: _UP4_TAAAAACAAGCCCTATTTTG

References

Research papers

• 29794222