SubtiBank SubtiBank
ydgI [2018-06-21 18:05:37]
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ydgI [2018-06-21 18:05:37]

similar to NADH dehydrogenase
locus
BSU05660
pI
4.65
mw
23.21 kDa
protein length
209 aa Sequence Blast
gene length
627 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    612,191 → 612,820

    The protein

    Protein family

  • nitroreductase family (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|E8D1416DB588A4D72E84341F5EAB845E77A84792|ydgJ]-[gene|8EE3F368AB1CD4BB14E42135D63D27138D3FED03|ydgI]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-C175 (ydgI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2173 NBRP B. subtilis, Japan]
  • BKE05660 (Δ[gene|8EE3F368AB1CD4BB14E42135D63D27138D3FED03|ydgI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTGATCATGTTGATACACTC, downstream forward: _UP4_TGCCGATTGATACAATTGCAG
  • BKK05660 (Δ[gene|8EE3F368AB1CD4BB14E42135D63D27138D3FED03|ydgI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTGATCATGTTGATACACTC, downstream forward: _UP4_TGCCGATTGATACAATTGCAG