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nicK [2019-06-21 10:47:55]
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nicK [2019-06-21 10:47:55]

DNA relaxase, similar to transposon protein
Locus
BSU04870
Isoelectric point
5.13
Molecular weight
40.78 kDa
Protein length
352 aa Sequence Blast
Gene length
1059 bp Sequence Blast
Function
conjugation of ICE BS1
Product
DNA relaxase, similar to transposon protein
Essential
no
Synonyms
ydcR

Genomic Context

      
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Categories containing this gene/protein

Gene

Coordinates
534,773 535,831

The protein

Protein family

  • plasmid replication initiation factor family (according to Swiss-Prot)
  • Expression and Regulation

    Operons

    Description

    Regulatory mechanism

  • ImmR: repression, PubMed, in ImmR regulon
  • Regulation

  • strongly induced in the presence of salt (1.2 M NaCl) PubMed
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    Biological materials

    Mutant

  • BKE04870 (nicK::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GCTCATCCATTCGCTTCGCT, downstream forward: _UP4_TAAAACCAAGCTGCTAAACC
  • BKK04870 (nicK::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GCTCATCCATTCGCTTCGCT, downstream forward: _UP4_TAAAACCAAGCTGCTAAACC
  • References

    Reviews

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    Original Publications

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