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yfiG [2018-10-04 20:14:07]
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yfiG [2018-10-04 20:14:07]

D-chiro-inositol transport protein
locus
BSU08260
pI
10.12
mw
52.59 kDa
protein length
482 aa Sequence Blast
gene length
1446 bp Sequence Blast
function
uptake of D-chiro-inositol
product
D-chiro-inositol transport protein
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.3|Carbohydrate transporter]
  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.16|Utilization of inositol]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    900,080 → 901,528

    The protein

    Protein family

  • View classification (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|A84AC4E40E7C722E27AE9C24ACECFEABD51B57BE|YncC], [protein|0757FAEB38AA1C599C5067794AF83A4BA5912DC9|CsbC], [protein|4A77316AA94F9C11DB70AB76711AACBD28098AA1|IolT], [protein|770D9A5BEEEABE9C3FC772E74001329206ECFAB3|AraE], [protein|7CE5A42042E5D52768735E795DB805530691D8A6|YwtG]

    • Structure

  • [PDB|4LDS] (from Staphylococcus epidermidis, 37% identity) [pubmed|24127585]

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|8B0701B5694ABA8142476CB896E590FE1981D7DB|yfiG]-[gene|8DA8F976B846665FA9E6BD0FF86FE1F58CCFD260|yfiH]-[gene|03BE6DA854612B3F6741E0E167AB310F0DE96285|yfiI]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C297 (yfiG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2295 NBRP B. subtilis, Japan]
  • BKE08260 (Δ[gene|8B0701B5694ABA8142476CB896E590FE1981D7DB|yfiG]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08260 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGGCTTTCTTCCCCTTCT, downstream forward: _UP4_TAACCTGAGATACCAGGAGG
  • BKK08260 (Δ[gene|8B0701B5694ABA8142476CB896E590FE1981D7DB|yfiG]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08260 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGGCTTTCTTCCCCTTCT, downstream forward: _UP4_TAACCTGAGATACCAGGAGG

    • References

    Research papers

  • 24127585