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xynD [2017-8-11 16:0:3]
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xynD [2017-8-11 16:0:3]

arabinoxylan arabinofuranohydrolase
locus
BSU18160
pI
8.03
mw
54.33 kDa
protein length
513 aa Sequence Blast
gene length
1539 bp Sequence Blast
function
arabinoxylan degradation
product
arabinoxylan arabinofuranohydrolase
essential
no
ec
3.2.1.55
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.27|Utilization of other polymeric carbohydrates]
  • [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]

    • Gene

    Coordinates
    1,944,113 → 1,945,654

    The protein

    Catalyzed reaction/ biological activity

  • Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides (according to Swiss-Prot)

    • Protein family

  • glycosyl hydrolase 43 family (according to Swiss-Prot)

    • Structure

  • [PDB|3C7O] [Pubmed|18980579]

    • [SW|Localization]

  • extracellular (signal peptide) [Pubmed|18957862]

    • Expression and Regulation

    Operons

    genes
    [gene|8A02D56A403BF2E34B84DF0F44347AA2D091D831|xynD]-[gene|55D7F05F8592A53A58A032C78B847782E598B268|xynC]
    description
    [Pubmed|20817675]

    regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]
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    References

  • 18957862,20817675,18980579