SubtiBank SubtiBank
SR5 [Sun Dec 18 2016 20:33:48 GMT+0100 (CET)]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

SR5 [Sun Dec 18 2016 20:33:48 GMT+0100 (CET)]

antisense RNA, controls expression of the BsrE toxin
Locus
new_2069824_2069977
Isoelectric point
0.00
Molecular weight
0.00 kDa
Function
control of BsrE toxin expression
Product
antisense RNA to bsrE
Synonyms
S717
Outlinks
KEGGBsubCycExpression Browser

Genomic Context

      
Loading

Categories containing this gene/protein

  • Lifestyles → Coping with stress → Toxins, antitoxins and immunity against toxins → Type 1 TA systems
  • Groups of genes → NcRNA → Antisense RNAs of toxin/antitoxin systems

    • Categories containing this gene/protein

  • toxins, antitoxins and immunity against toxins, ncRNA

    • Gene

    Coordinates on the chromosome
    2,069,824 -> 2,069,977

    The RNA

    Catalyzed reaction/ biological activity

  • Anti-toxin to BsrE PubMed

    • Expression and Regulation

    Operon

  • SR5 PubMed

    • Additional information

  • RNA half-life: 7 min PubMed, half life of the RNA is increased in rnjA, rnjB, gapA, and ykzWmutants PubMed
  • degradation of the RNA depends on RnjA PubMed
  • maturation of the SR5 RNA requires processing by PnpA PubMed
  • upon ethanol stress, the RNA is degraded by Rny PubMed

    • Labs working on this gene/RNA

  • Sabine Brantl

    • References

    Original publications

    Loading