SR5 [Tue Mar 08 2016 10:55:28 GMT+0100 (CET)]

antisense RNA, controls expression of the BsrE toxin

locus: new_2069824_2069977

pI: 0.00

mw: 0.00 kDa

function: control of BsrE toxin expression

product: antisense RNA to bsrE

synonyms: S717

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.17|Toxins, antitoxins and immunity against toxins] → [category|SW 4.3.17.1|Type 1 TA systems]
• [category|SW 6|Groups of genes] → [category|SW 6.9|NcRNA] → [category|SW 6.9.6|Antisense RNAs of toxin/antitoxin systems]

[SW|Categories] containing this gene/protein

• [SW|toxins, antitoxins and immunity against toxins], [SW|ncRNA]

Gene

Coordinates on the chromosome: 2,069,824 -> 2,069,977

The RNA

Catalyzed reaction/ biological activity

• Anti-toxin to [protein|search|BsrE] [Pubmed|26565032]

Expression and Regulation

Operon

• ''[SW|SR5]'' [Pubmed|26565032]

Additional information

• mRNA half-life: 7 min [Pubmed|26940229]
• degradation of the RNA depends on [SW|RnjA] [Pubmed|26940229]
• maturation of the SR5 RNA requires processing by [SW|PnpA] [Pubmed|26940229]
• upon ethanol stress, the RNA is degraded by [SW|Rny] [Pubmed|26940229]

Labs working on this gene/RNA

• [SW|Sabine Brantl]

References

Original publications

• 26565032,26940229