SubtiBank SubtiBank
yfmG [2020-04-13 16:38:28]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yfmG [2020-04-13 16:38:28]

unknown
Locus
BSU_07480
Isoelectric point
5.18
Molecular weight
56.37 kDa
Protein length
487 aa Sequence Blast
Gene length
1464 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
Loading

Categories containing this gene/protein

  • Groups of genes → Phosphoproteins → Phosphorylation on an Arg residue
  • Groups of genes → Proteins of unknown function

    • Gene

    Coordinates
    820,867 822,330

    The protein

    Modification

  • phosphorylated on Arg-474 PubMed

    • Expression and Regulation

    Operons

    Genes
    yfmH-yfmG
    Description
    PubMed

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon

    • Regulatory mechanism

  • AbrB: repression, PubMed, in AbrB regulon
  • YfmH: attenuation, PubMed, in YfmH regulon

    • Regulation

  • repressed by glucose (4-fold) PubMed

    • Additional information

  • A ncRNA is predicted between yfmI and yfmG, this has been shown to encode the leader peptide, YfmH PubMed
  • Expression of yfmG is controlled by YfmH-mediated attenuation: slow translation rates of YfmH due to amino acid limitation prevent the formation in the yfmG leader (reduced expression of yfmG if amino acids are available in excess) PubMed
    • view in new tab

    Biological materials

    Mutant

  • MGNA-C243 (yfmG::erm), available at the NBRP B. subtilis, Japan
  • BKE07480 (yfmG::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CAAATTACGATAACCTCCCG, downstream forward: _UP4_TAATCATTCTAGGTTAGAGA
  • BKK07480 (yfmG::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CAAATTACGATAACCTCCCG, downstream forward: _UP4_TAATCATTCTAGGTTAGAGA

    • References

    Loading