yhaP [2018-09-12 17:44:45]

similar to ABC transporter (membrane protein)

locus: BSU09900

pI: 5.31

mw: 45.27 kDa

protein length: 419 aa

gene length: 1257 bp

function: unknown

product: ABC transporter (membrane protein)

essential: no

synonyms: natB

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.6|Exporters of unknown function]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 1,063,480 → 1,064,739

The protein

[SW|Localization]

• cell membrane (Septum) [Pubmed|16479537]

Expression and Regulation

Operons

• genes: [gene|C1FE13182E3E62EBC9650B02DAA0D574332A5F4D|yhaQ]-[gene|887036DE96BD6174EAC2E7201BEEDE99E45EDDF0|yhaP]
  description: [Pubmed|20817675]

  regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675,18840696], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

  regulation

  • repressed during logarithmic phase ([protein|search|AbrB]) [Pubmed|18840696]

Biological materials

Mutant

• MGNA-C045 (natB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2043 NBRP B. subtilis, Japan]
• BKE09900 (Δ[gene|887036DE96BD6174EAC2E7201BEEDE99E45EDDF0|yhaP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09900 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGTATGAGAAAGCATGATCC, downstream forward: _UP4_TGATTGGAAAACAGCCTGGG
• BKK09900 (Δ[gene|887036DE96BD6174EAC2E7201BEEDE99E45EDDF0|yhaP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09900 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGTATGAGAAAGCATGATCC, downstream forward: _UP4_TGATTGGAAAACAGCCTGGG

References

• 10092453,18840696,16479537,21630458,20817675