SubtiBank SubtiBank
yvqJ [2019-06-12 10:23:01]
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yvqJ [2019-06-12 10:23:01]

similar to to macrolide-efflux protein
locus
BSU33140
pI
9.02
mw
45.74 kDa
protein length
422 aa Sequence Blast
gene length
1269 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.14|Resistance against toxins/ antibiotics/ based on similarity]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,399,092 3,400,360

    The protein

    Protein family

  • [SW|major facilitator superfamily] (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|8840F24C0E159CA1483D9A9164B31E09C8635610|yvqJ]
    description
    [pubmed|22383849]

    regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]
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    Biological materials

    Mutant

  • MGNA-B041 (yvqJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1040 NBRP B. subtilis, Japan]
  • BKE33140 ([gene|8840F24C0E159CA1483D9A9164B31E09C8635610|yvqJ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCATCAGAGCCCCCCGT, downstream forward: _UP4_TAAAGGGTTTTAAAACGCCA
  • BKK33140 ([gene|8840F24C0E159CA1483D9A9164B31E09C8635610|yvqJ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCATCAGAGCCCCCCGT, downstream forward: _UP4_TAAAGGGTTTTAAAACGCCA

    • References

  • 20817675