yusQ

similar to acyloate catabolism

locus: BSU_32890

pI: 5.47

mw: 15.11 kDa

protein length: 127 aa

gene length: 384 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

Gene

Coordinates: 3,376,617 3,377,000

The protein

Protein family

• [SW|4-oxalocrotonate tautomerase family] (according to UniProt)

Paralogous protein(s)

• [protein|1F6B2CF88F5C6498A035FA0465136EF9D0BF93BC|YodA]

Structure

• [PDB|2AAG] (from Pseudomonas pavonaceae, 27% identity) [pubmed|16274229]

Expression and Regulation

Operons

• genes: [gene|652A1CC7F6D33E2C9032E557FAF34B5A828CD441|yusS]-[gene|6A16E8F87DA1D5835DFCD5803B11D0E004E6F4FE|yusR]-[gene|877C25D538BAF1132290BAF7FBB2E7921B51266A|yusQ]
  description: [pubmed|22383849]

  sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|15699190], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]

Biological materials

Mutant

• MGNA-B596 (yusQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1595 NBRP B. subtilis, Japan]
• BKE32890 ([gene|877C25D538BAF1132290BAF7FBB2E7921B51266A|yusQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE32890 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGGCATCTCCCCGCATCCCT, downstream forward: _UP4_TAAAAAACCCCGCGGATTGA
• BKK32890 ([gene|877C25D538BAF1132290BAF7FBB2E7921B51266A|yusQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK32890 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGGCATCTCCCCGCATCCCT, downstream forward: _UP4_TAAAAAACCCCGCGGATTGA

References

Research papers

• 16274229