SubtiBank SubtiBank
ytfP
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ytfP

putative NAD(FAD)-utilizing dehydrogenase
locus
BSU_30060
pI
9.57
mw
35.01 kDa
protein length
420 aa Sequence Blast
gene length
1263 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    3,075,367 3,076,629

    The protein

    Structure

  • [PDB|2I0Z] (from B. cereus, 70% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|86274AAF9E0D0882F1AD9D4A528BECB013B71C38|ytfP]-[gene|597B517CA4277E33153F80919213BFF7BE495563|opuD]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|21296969], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]
  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|21296969], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

    • regulation

  • induced by cold stress [Pubmed|21296969]
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    Biological materials

    Mutant

  • MGNA-A816 (ytfP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/816 NBRP B. subtilis, Japan]
  • BKE30060 ([gene|86274AAF9E0D0882F1AD9D4A528BECB013B71C38|ytfP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTATCATCAACTTTC, downstream forward: _UP4_TAATCATTACTCTTTAAATC
  • BKK30060 ([gene|86274AAF9E0D0882F1AD9D4A528BECB013B71C38|ytfP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTATCATCAACTTTC, downstream forward: _UP4_TAATCATTACTCTTTAAATC