yycR

similar to formaldehyde dehydrogenase

locus: BSU_40250

pI: 5.79

mw: 42.79 kDa

protein length: 408 aa

gene length: 1227 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

Gene

Coordinates: 4,135,798 4,137,024

The protein

Protein family

• [SW|zinc-containing alcohol dehydrogenase family] (according to UniProt)

Paralogous protein(s)

• [protein|EA4CC0D36C39957DBBF9B1B11F65F33E8CD81FFE|AdhB]:

Structure

• [PDB|4JLW] (from Pseudomonas aeruginosa) [pubmed|23989142]

Expression and Regulation

Operons

• genes: [gene|7F4C5AD47D167683F96CC2841039512E70CC4F1C|yycR]
  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-B816 (yycR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1815 NBRP B. subtilis, Japan]
• BKE40250 ([gene|7F4C5AD47D167683F96CC2841039512E70CC4F1C|yycR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40250 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCATGTGTTTGGACTCT, downstream forward: _UP4_TAAAAGAAAAAGCCGGACGT
• BKK40250 ([gene|7F4C5AD47D167683F96CC2841039512E70CC4F1C|yycR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40250 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCATGTGTTTGGACTCT, downstream forward: _UP4_TAAAAGAAAAAGCCGGACGT

References

Research papers

• 23989142