yvgL [2018-05-04 14:30:34]

similar to [SW|ABC transporter] for molybdenum uptake (binding protein)

locus: BSU33380

pI: 5.10

mw: 28.21 kDa

protein length: 260 aa

gene length: 780 bp

function: unknown

product: [SW|ABC transporter] (binding protein)

essential: no

synonyms: yvsD

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.1|Importers] → [category|SW 1.2.1.1.6|Uptake of ions]
• [category|SW 1|Cellular processes] → [category|SW 1.3|Homeostasis] → [category|SW 1.3.2|Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo)] → [category|SW 1.3.2.4|Trace metals/ Other]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 3,425,272 → 3,426,054

The protein

Structure

• [PDB|2H5Y] (from Xanthomonas citri, 33% identity)

Expression and Regulation

Operons

• genes: [gene|7DCC368C52FB0DA12D807919CFEB49E2625932D3|yvgL]-[gene|D45E06B22749CD1127C07152515F5EF795B420FF|yvgM]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B063 (yvgL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1062 NBRP B. subtilis, Japan]
• BKE33380 (Δ[gene|7DCC368C52FB0DA12D807919CFEB49E2625932D3|yvgL]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATTGCACCCCTTATCA, downstream forward: _UP4_GAAGCAATGAAAGTATTTGA
• BKK33380 (Δ[gene|7DCC368C52FB0DA12D807919CFEB49E2625932D3|yvgL]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATTGCACCCCTTATCA, downstream forward: _UP4_GAAGCAATGAAAGTATTTGA

References

• 10092453