SubtiBank SubtiBank
kipR
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

kipR

transcriptional repressor of the kip operon
Locus
BSU_04100
Isoelectric point
5.43
Molecular weight
27.16 kDa
Protein length
250 aa Sequence Blast
Gene length
753 bp Sequence Blast
Function
regulation of sporulation initiation
Product
transcriptional regulator
Essential
no
Synonyms
ycsO
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
Loading

Categories containing this gene/protein

  • Information processing → Regulation of gene expression → Transcription factors and their control → Transcription factors/ other
  • Information processing → Regulation of gene expression → phosphorelay
  • Lifestyles → Sporulation → phosphorelay

    • Gene

    Coordinates
    461,615 462,367

    The protein

    Domains

  • HTH iclR-type domain (aa 5-65) (according to UniProt)
  • IclR-ED (aa 80-249) (according to UniProt)

    • Structure

  • 1MKM (from Thermotoga maritima, 33% identity) PubMed

    • Expression and Regulation

    Operons

    Genes
    pxpA-ycsG-ycsI-pxpB-pxpC-kipR-lipC
    Description
    PubMed

    Regulatory mechanism

  • KipR: repression, PubMed, in KipR regulon
  • TnrA: activation, PubMed, in TnrA regulon

    • Regulation

  • induced in the presence of 5-oxoproline PubMed
    • view in new tab

    Biological materials

    Mutant

  • BKE04100 (kipR::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_ATTCTGCATCATTCATCCCC, downstream forward: _UP4_TAAGTAGCCAATCTTTTCTC
  • BKK04100 (kipR::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_ATTCTGCATCATTCATCCCC, downstream forward: _UP4_TAAGTAGCCAATCTTTTCTC

    • References

    Loading