yvrP [2019-02-01 14:27:25]

putative efflux system protein

locus: BSU33280

pI: 4.61

mw: 43.33 kDa

protein length: 397 aa

gene length: 1194 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 3,414,023 3,415,216

The protein

Protein family

• [SW|Membrane fusion protein (MFP) (TC 8.A.1) family] (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|7D334BBF7628D1DA001727CF7BEDB4EFA7FF88BA|yvrP]-[gene|0F8048267EC038D8CF673317D969BA27735473A7|yvrO]-[gene|5AEDC5B857537B7D2A2637C0BC5BE78FD09A66B3|yvrN]
  description: [Pubmed|20817675]

  regulatory mechanism

  • [protein|08CFA2C72931A75532D4289BC1D18A826DE9F9CA|ComK]: activation, [Pubmed|11948146], in [regulon|08CFA2C72931A75532D4289BC1D18A826DE9F9CA|ComK regulon]
  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

Biological materials

Mutant

• MGNA-B058 (yvrP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1057 NBRP B. subtilis, Japan]
• BKE33280 ([gene|7D334BBF7628D1DA001727CF7BEDB4EFA7FF88BA|yvrP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33280 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAACGATCTCCTCTTTCT, downstream forward: _UP4_GTCAATGCTGACACTGAATA
• BKK33280 ([gene|7D334BBF7628D1DA001727CF7BEDB4EFA7FF88BA|yvrP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33280 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAACGATCTCCTCTTTCT, downstream forward: _UP4_GTCAATGCTGACACTGAATA

References

• 11948146,20817675