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ydbM
function
sulphur metabolism
product
acyl-CoA dehydrogenase
Genomic Context
categories
[category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]Gene
Coordinates
505,152 506,297
The protein
Protein family
[SW|Acyl-CoA dehydrogenase family] (according to UniProt)[SW|Cofactors]
FAD (according to UniProt) [Pubmed|21635694]Structure
[PDB|3MXL] (from ''Micromonospora carbonacea var. africana'', 30% identity) [Pubmed|20866105]Expression and Regulation
Operons
genes
[gene|7B27ADD1CC7A9BCE0F602FA080B5FD0DB66380A0|ydbM]
description
[Pubmed|22383849]
regulatory mechanism
[protein|50930C56C27D22715620A350220E3C56ADB41020|CymR]: repression, [Pubmed|16513748], in [regulon|50930C56C27D22715620A350220E3C56ADB41020|CymR regulon]regulation
repressed in the presence of cysteine ([protein|50930C56C27D22715620A350220E3C56ADB41020|CymR]) [Pubmed|16513748]view in new tabBiological materials
Mutant
MGNA-C119 (ydbM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2117 NBRP B. subtilis, Japan]BKE04520 ([gene|7B27ADD1CC7A9BCE0F602FA080B5FD0DB66380A0|ydbM]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE04520 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCGGCAGCCCCCCAGTT, downstream forward: _UP4_TAAAAAAAAGAGCCTTACCGBKK04520 ([gene|7B27ADD1CC7A9BCE0F602FA080B5FD0DB66380A0|ydbM]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK04520 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCGGCAGCCCCCCAGTT, downstream forward: _UP4_TAAAAAAAAGAGCCTTACCGReferences
16513748,16513748,20866105