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rpsD [Wed Aug 31 2016 18:01:03 GMT+0200 (CEST)]
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rpsD [Wed Aug 31 2016 18:01:03 GMT+0200 (CEST)]

ribosomal protein
Locus
BSU29660
Isoelectric point
10.00
Molecular weight
22.00 kDa
Function
translation
Product
ribosomal protein S4 (BS4)
Essential
yes
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Information processing → Protein synthesis, modification and degradation → Translation → Ribosomal proteins
  • Groups of genes → Essential genes
  • Groups of genes → Universally conserved proteins

    • Categories containing this gene/protein

  • translation, essential genes, universally conserved proteins

    • This gene is a member of the following regulons

  • stringent response

    • Gene

    Coordinates on the chromosome (coding sequence)
    3,035,730 -> 3,036,332

    Phenotypes of a mutant

  • essential PubMed

    • The protein

    Protein family

  • ribosomal protein S4P family (according to Swiss-Prot)

    • Structure

  • 1C06 (Geobacillus stearothermophilus)
  • 3J9W (the ribosome) PubMed

    • Expression and Regulation

    Operon

  • rpsD PubMed

    • Sigma factor

  • SigA PubMed

    • Regulation

  • RelA dependent downregulation (Class I) during stringent response PubMed
  • autorepression of rpsD expression upon binding of excess RpsD to a RNA switch in the untranslated region of the rpsD mRNA PubMed
  • expression is reduced during ethanol stress due to the action of the antisense RNA S1136-1134 PubMed

    • References

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