SubtiBank SubtiBank
swsB
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

swsB

similar to deacetylase, required for efficient degradation of the spore cortex by CwlJ during germination
Locus
BSU_16700
Isoelectric point
9.36
Molecular weight
36.31 kDa
Protein length
319 aa Sequence Blast
Gene length
960 bp Sequence Blast
Function
required for spore cortex degradation during germination
Product
unknown
Essential
no
Synonyms
ylxY,ymxI
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
Loading

Categories containing this gene/protein

  • Lifestyles → Sporulation → Germination → Additional germination proteins
  • Groups of genes → Poorly characterized/ putative enzymes

    • Gene

    Coordinates
    1,741,618 1,742,577

    The protein

    Protein family

  • polysaccharide deacetylase family (according to UniProt)

    • Domains

  • NodB homology domain (aa 130-306) (according to UniProt)

    • Structure

  • 1W17 (PdaA, corresponds to aa 120 ... 317, 31% identity) PubMed

    • Biological materials

    Mutant

  • BKE16700 (swsB::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTTCTGTCCCCCCCTCA, downstream forward: _UP4_TAACAGATGAAGGCAGCTTG
  • BKK16700 (swsB::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTTCTGTCCCCCCCTCA, downstream forward: _UP4_TAACAGATGAAGGCAGCTTG

    • References

    Loading