ydaS

general stress protein

locus: BSU_04370

pI: 12.19

mw: 8.51 kDa

protein length: 85 aa

gene length: 258 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]

Gene

Coordinates: 492,654 492,911

The protein

Protein family

• UPF0410 family (with [protein|050A2F1399C2B0831A24623867875BFEBD02AA71|YwzA], according to UniProt)

Expression and Regulation

Operons

• genes: [gene|7601A53CE6A8AD417AADBED3199DB46B285D9059|ydaS]
  description: [Pubmed|10482513]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|10482513], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

  regulation

  • induced by stress ([protein|search|SigB]) [Pubmed|15805528]

• genes: [gene|E30C92E8D0CC56F7406B87B7EA25B7C41086DD73|ydaT]-[gene|7601A53CE6A8AD417AADBED3199DB46B285D9059|ydaS]
  description: [Pubmed|10482513]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|10482513], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

  regulation

  • induced by stress ([protein|search|SigB]) [Pubmed|15805528]

Biological materials

Mutant

• MGNA-C112 (ydaS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2110 NBRP B. subtilis, Japan]
• BKE04370 ([gene|7601A53CE6A8AD417AADBED3199DB46B285D9059|ydaS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE04370 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATGATCACCTCTCATA, downstream forward: _UP4_TAGACTCATTAGATACAGGA
• BKK04370 ([gene|7601A53CE6A8AD417AADBED3199DB46B285D9059|ydaS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK04370 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATGATCACCTCTCATA, downstream forward: _UP4_TAGACTCATTAGATACAGGA

References

• 15805528,10482513