hemY [2019-05-02 17:56:06]

coproporphyrinogen oxidase

locus: BSU10140

pI: 8.04

mw: 51.04 kDa

protein length: 470 aa

gene length: 1413 bp

function: biosynthesis of heme

product: coproporphyrinogen oxidase

essential: no

ec: 1.3.3.4

synonyms: hemG

Genomic Context

categories

• [category|SW 2|Metabolism] → [category|SW 2.6|Additional metabolic pathways] → [category|SW 2.6.2|Biosynthesis of cofactors] → [category|SW 2.6.2.6|Biosynthesis of heme/ siroheme]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 1,088,197 1,089,609

The protein

Catalyzed reaction/ biological activity

• coproporphyrinogen --> coproporphyrin [pubmed|25646457]

Protein family

• protoporphyrinogen oxidase family (according to Swiss-Prot)

Structure

• [PDB|3I6D]

[SW|Localization]

• cell membrane (peripheral) [pubmed|7928957]

Expression and Regulation

Operons

• genes: [gene|762E7731EFEAC9F38074D7A7E9A3E5759437CDCA|hemE]-[gene|E4C588EC93132CCBE4F40559F8A480A66A2D82D7|hemH]-[gene|7541AD7D06BC4CE30AD576562E0053CC1E25B4D6|hemY]
  description: [Pubmed|1459957]

Biological materials

Mutant

• BKE10140 ([gene|7541AD7D06BC4CE30AD576562E0053CC1E25B4D6|hemY]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE10140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTCACTCATGTTCATCGCCT, downstream forward: _UP4_TAAAACCTCCGCTTTATCGC
• BKK10140 ([gene|7541AD7D06BC4CE30AD576562E0053CC1E25B4D6|hemY]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK10140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTCACTCATGTTCATCGCCT, downstream forward: _UP4_TAAAACCTCCGCTTTATCGC

References

Reviews

• 28123057

Original Publications

• 9217019,1459957,7928957,19266155,19944166,22273380,25646457,8288631,28739897