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rpsJ [Wed Aug 31 2016 17:27:45 GMT+0200 (CEST)]
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rpsJ [Wed Aug 31 2016 17:27:45 GMT+0200 (CEST)]

ribosomal protein
locus
BSU01150
pI
10.00
mw
11.00 kDa
function
translation
product
ribosomal protein S10 (BS13)
essential
yes
synonyms
tetA
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.4|Ribosomal proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.1|Essential genes]
  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.5|Phosphorylation on a Ser residue]
  • [category|SW 6|Groups of genes] → [category|SW 6.5|Universally conserved proteins]

    • [SW|Categories] containing this gene/protein

  • [SW|translation], [SW|phosphoproteins], [SW|essential genes], [SW|universally conserved proteins]

    • This gene is a member of the following [SW|regulons]

  • [SW|stringent response]

    • Gene

    Coordinates on the chromosome (coding sequence)
    135,364 -> 135,672

    Phenotypes of a mutant

  • essential [Pubmed|23002217,12682299]

    • The protein

    Protein family

  • [SW|ribosomal protein] S10P family (according to Swiss-Prot)

    • Modification

  • phosphorylated on Ser-32 during [SW|germination] [Pubmed|26381121]

    • Structure

  • [PDB|3J9W] (the [SW|ribosome]) [Pubmed|25903689]

    • [SW|Localization]

  • located near the aminoacyl-tRNA site of the 30S ribosomal subunit [Pubmed|23759864]

    • [SW|Interactions]

  • [protein|search|RpsJ]-[SW|16S rRNA] [Pubmed|11007480]

    • Expression and Regulation

    Operon

  • ''[protein|search|rpsJ]-[protein|search|rplC]-[protein|search|rplD]-[protein|search|rplW]-[protein|search|rplB]-[protein|search|rpsS]-[protein|search|rplV]-[protein|search|rpsC]-[protein|search|rplP]-[protein|search|rpmC]-[protein|search|rpsQ]-[protein|search|rplN]-[protein|search|rplX]-[protein|search|rplE]-[protein|search|rpsN]-[protein|search|rpsH]-[protein|search|rplF]-[protein|search|rplR]-[protein|search|rpsE]-[protein|search|rpmD]-[protein|search|rplO]'' [Pubmed|9371452]

    • [SW|Sigma factor]

  • [protein|search|SigA] two promoters, about 140bp and 200bp upstream of the start codon [Pubmed|9371452]

    • Regulation

  • [protein|search|RelA] dependent downregulation (Class I) during stringent response [Pubmed|11948165]

    • Biological materials

    lacZ fusion

  • pGP605 (in [protein|search|pAC6]), available in [SW|Jörg Stülke]'s lab
  • pGP2201 (in [protein|search|pAC7]), available in [SW|Jörg Stülke]'s lab
  • pGP2439 (in [protein|search|pAC7]), available in [SW|Jörg Stülke]'s lab
  • pGP2472 (in [protein|search|pAC5]), available in [SW|Jörg Stülke]'s lab
  • pGP2473 (in [protein|search|pAC6]), available in [SW|Jörg Stülke]'s lab

    • References

    Reviews

  • 15621428

    • Original publications

  • 19653700,9371452,11948165,8635744,23759864,23002217,11007480,26381121,25903689