SubtiBank SubtiBank
ytzL [2019-03-01 19:32:56]
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ytzL [2019-03-01 19:32:56]

unknown
locus
BSU30739
pI
5.50
mw
5.90 kDa
protein length
52 aa Sequence Blast
gene length
159 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
ythC
Outlinks
KEGGBsubCycUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]

    • Gene

    Coordinates
    3,141,900 3,142,058

    Expression and Regulation

    Operons

    genes
    [gene|74DEE21BF65279A02A64EFCB60A06573F7C46B19|ytzL]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [pubmed|30782632], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]
  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [pubmed|30782632], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]
    • view in new tab

    genes
    [gene|EB8AF295A11F28BDFAE39038FA89890824FC7791|ythA]-[gene|813E4BBEC8701114503ACD66DD6FE5A06B6B5E5F|ythB]-[gene|74DEE21BF65279A02A64EFCB60A06573F7C46B19|ytzL]
    description
    [Pubmed|22383849]

    regulation

  • expressed during [SW|sporulation] [Pubmed|22383849]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A289 (ythC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/289 NBRP B. subtilis, Japan]
  • BKE30739 ([gene|74DEE21BF65279A02A64EFCB60A06573F7C46B19|ytzL]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30739 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCCATCCCCTCCTTATA, downstream forward: _UP4_TTATAATTAAAAGAAAGAGC
  • BKK30739 ([gene|74DEE21BF65279A02A64EFCB60A06573F7C46B19|ytzL]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30739 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCCATCCCCTCCTTATA, downstream forward: _UP4_TTATAATTAAAAGAAAGAGC