SubtiBank SubtiBank
yvfS [2019-02-04 18:02:48]
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yvfS [2019-02-04 18:02:48]

similar to ABC transporter (transmembrane subunit)
locus
BSU34080
pI
9.76
mw
27.78 kDa
protein length
245 aa Sequence Blast
gene length
738 bp Sequence Blast
function
unknown
product
ABC transporter (transmembrane subunit)
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.6|Exporters of unknown function]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,497,614 3,498,351

    The protein

    Protein family

  • ABC-2 integral membrane protein family (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|B6BBB827CB475423FC9A781058141B7D05C4D284|yvfR]-[gene|72E387D5D44FA20D6EEFF1B39B6C9F322F966FC5|yvfS]
    description
    [Pubmed|26647299]
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    Biological materials

    Mutant

  • MGNA-A482 (yvfS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/482 NBRP B. subtilis, Japan]
  • BKE34080 ([gene|72E387D5D44FA20D6EEFF1B39B6C9F322F966FC5|yvfS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GCTTTGCTTTTGCAGCACGT, downstream forward: _UP4_AGAAAACAAGAAGCGGTGTA
  • BKK34080 ([gene|72E387D5D44FA20D6EEFF1B39B6C9F322F966FC5|yvfS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GCTTTGCTTTTGCAGCACGT, downstream forward: _UP4_AGAAAACAAGAAGCGGTGTA

    • References

  • 10092453,26647299,28461449