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citH [2018-02-08T06:08:04.000Z]
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citH [2018-02-08T06:08:04.000Z]

sporulation-specific secondary transporter of divalent metal ions/citrate complexes
locus
BSU39060
pI
9.28
mw
45.37 kDa
protein length
426 aa Sequence Blast
gene length
1278 bp Sequence Blast
function
citrate uptake
product
secondary transporter of divalent metal ions/citrate complexes
essential
no
synonyms
yxiQ
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.4|Transporter for organic acids]
  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.1|Utilization of organic acids]
  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    4,010,404 → 4,011,684

    The protein

    Paralogous protein(s)

  • [protein|C0DED68802EF78D2BC16507234AAC3B60D236E68|CitM]

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|71A73C825981E74842FC28D1B05CF85E9F3F5A56|citH]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|22383849], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]
  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]

    • regulation

  • expressed during [SW|sporulation] [Pubmed|22383849]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B723 (yxiQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1722 NBRP B. subtilis, Japan]
  • BKE39060 (Δ[gene|71A73C825981E74842FC28D1B05CF85E9F3F5A56|citH]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE39060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATATGACCTCCCCTAT, downstream forward: _UP4_TAAATGTATGAGCTTGATCG
  • BKK39060 (Δ[gene|71A73C825981E74842FC28D1B05CF85E9F3F5A56|citH]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK39060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATATGACCTCCCCTAT, downstream forward: _UP4_TAAATGTATGAGCTTGATCG

    • References

  • 8892821,22383849,11053381