nupO [2018-05-04 19:25:12]

[SW|ABC transporter ]for guanosine (ATP-binding protein)

locus: BSU31550

pI: 7.50

mw: 56.13 kDa

protein length: 510 aa

gene length: 1530 bp

function: uptake of guanosine

product: [SW|ABC transporter ]for guanosine

essential: no

synonyms: yufO

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.1|Importers] → [category|SW 1.2.1.1.1|Uptake of carbon sources]
• [category|SW 2|Metabolism] → [category|SW 2.5|Nucleotide metabolism] → [category|SW 2.5.2|Biosynthesis/ acquisition of nucleotides] → [category|SW 2.5.2.1|Biosynthesis/ acquisition of purine nucleotides]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 3,241,085 → 3,242,617

Phenotypes of a mutant

• a ''[gene|71546D1508EF17A208332E162CAE2C299987A569|nupO] [gene|C333F405F597FF260FFA0EC616B8CF6BF454815B|nupG]'' double mutant is unable to utilize externally provided guanosine [Pubmed|21926227]
• defective in the the ability to support the growth of ''Synechococcus leopoliensis'' CCAP1405/1 on agar media [Pubmed|25875741]

The protein

Protein family

• [SW|ABC transporter] family (according to Swiss-Prot)

Structure

• [PDB|5XJY] (human protein, 30% identity) [pubmed|28602350]

[SW|Localization]

• associated to the membrane (via [protein|0BB235F189D30C9BE798560C31DA59FF0112CFD9|NupP]-[protein|7A80910F4E62BA15DE93FFC70E1908FB5CB9542D|NupQ]) [Pubmed|10092453]

Expression and Regulation

Operons

• genes: [gene|19BA45BD691BBA4B23C4741C63DB729AA5D30FDA|nupN]-[gene|71546D1508EF17A208332E162CAE2C299987A569|nupO]-[gene|0BB235F189D30C9BE798560C31DA59FF0112CFD9|nupP]-[gene|7A80910F4E62BA15DE93FFC70E1908FB5CB9542D|nupQ]
  description: [Pubmed|21926227]

  sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|21926227], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

  regulatory mechanism

  • [protein|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|CodY]: repression, [Pubmed|12618455,21699902,21926227], in [regulon|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|CodY regulon]

  regulation

  • repressed during growth in the presence of branched chain amino acids ([protein|search|CodY]) [Pubmed|12618455,21699902,21926227]

Biological materials

Mutant

• MGNA-B554 (yufO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1553 NBRP B. subtilis, Japan]
• BKE31550 (Δ[gene|71546D1508EF17A208332E162CAE2C299987A569|nupO]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE31550 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGATTGACCGCTCCTTT, downstream forward: _UP4_ACGCAAAAGGAAGCGGGGAA
• BKK31550 (Δ[gene|71546D1508EF17A208332E162CAE2C299987A569|nupO]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK31550 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGATTGACCGCTCCTTT, downstream forward: _UP4_ACGCAAAAGGAAGCGGGGAA

References

• 10092453,21926227,12618455,25875741