yolA [2019-07-03 11:12:52]

unknown

locus: BSU21540

pI: 9.75

mw: 17.09 kDa

protein length: 155 aa

gene length: 468 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]
• [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]

Gene

Coordinates: 2,272,896 2,273,363

The protein

Protein family

• ypeB family (according to Swiss-Prot)

Structure

• [PDB|2LR4]

[SW|Localization]

• extracellular (signal peptide) [Pubmed|18957862]

Expression and Regulation

Operons

• genes: [gene|7040EC033DB7B1960813D2378AC70262CB7B87C9|yolA]-[gene|1F99778502096A7EA726EB767E1BA5F0D1F770AB|yolB]
  description: [Pubmed|20817675]

  regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

  additional information

  • A [protein|search|ncRNA] is predicted between '[protein|search|yolA]' and '[protein|search|yokL]' [PubMed|20525796]

Biological materials

Mutant

• BKE21540 ([gene|7040EC033DB7B1960813D2378AC70262CB7B87C9|yolA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCCTAAATCCTCCTTG, downstream forward: _UP4_GATTTTGAAAGAGAGTGAAC
• BKK21540 ([gene|7040EC033DB7B1960813D2378AC70262CB7B87C9|yolA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCCTAAATCCTCCTTG, downstream forward: _UP4_GATTTTGAAAGAGAGTGAAC

References

• 18957862,20525796,20817675