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yvdB [2019-08-26 10:00:18]
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yvdB [2019-08-26 10:00:18]

putative anion transporter
locus
BSU_34660
pI
9.64
mw
57.26 kDa
protein length
530 aa Sequence Blast
gene length
1593 bp Sequence Blast
function
unknown
product
putative anion transporter
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,559,979 3,561,571

    The protein

    Protein family

  • SLC26A/SulP transporter (TC 2.A.53) family (with [protein|58B61B18D1C69BB9DCAB5EDFBFB3A498AA121386|YbaR], according to UniProt)

    • Structure

  • [PDB|5DA0] (fumarate transporter from Deinococcus geothermalis, 31% identity) [pubmed|26367249]

    • [SW|Localization]

  • cell membrane (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|E00889289B07BE78CC0C8E0962A55C3B14871E00|yvdA]-[gene|7028580E25DD6C1D49A14F29DDCC02012F94FED7|yvdB]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B631 (yvdB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1630 NBRP B. subtilis, Japan]
  • BKE34660 ([gene|7028580E25DD6C1D49A14F29DDCC02012F94FED7|yvdB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TCGCATATTTTGTTATAACC, downstream forward: _UP4_TAAAAAAAGCGGCCATCGCG
  • BKK34660 ([gene|7028580E25DD6C1D49A14F29DDCC02012F94FED7|yvdB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TCGCATATTTTGTTATAACC, downstream forward: _UP4_TAAAAAAAGCGGCCATCGCG

    • References

  • 22383849,26367249