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ysbA [2017-8-11 16:0:3]
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ysbA [2017-8-11 16:0:3]

putative pyruvate transporter
locus
BSU28910
pI
9.82
mw
15.57 kDa
protein length
146 aa Sequence Blast
gene length
438 bp Sequence Blast
function
uptake of pyruvate
product
putative pyruvate transporter
essential
no
synonyms
lrgA
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.4|Transporter for organic acids]
  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.1|Utilization of organic acids]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    2,955,209 → 2,955,649

    Phenotypes of a mutant

  • no growth with pyruvate as the single carbon source [Pubmed|27422364]
  • ''[gene|6F21B5E9EEF67E96808A1DEFA3A80DA2A0FF9462|pftA]-[gene|F6C3B267106E7510FABECF0B13ABF222901689A9|pftB]'' mutant is delayed in pellicle formation [Pubmed|26060272]
  • a ''[gene|7DA08C189F5524D4874E2F4828264AB2671A5460|ywbH]-[gene|2940E73F0BCAB69992BBD224402C95C2667757AD|ywbG] [gene|E5E431AC5A7D03EEFF6D694CB25EED1570D739A2|yxaK]-[gene|5A43EDB738641C675D4136269F3638F9B609F238|yxaC] [gene|6F21B5E9EEF67E96808A1DEFA3A80DA2A0FF9462|pftA]-[gene|F6C3B267106E7510FABECF0B13ABF222901689A9|pftB]'' triple mutant is severely delayed in pellicle formation [Pubmed|26060272]

    • The protein

    Protein family

  • LrgA subfamily (according to Swiss-Prot)

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|6F21B5E9EEF67E96808A1DEFA3A80DA2A0FF9462|pftA]-[gene|F6C3B267106E7510FABECF0B13ABF222901689A9|pftB]
    description
    [Pubmed|21815947]

    regulatory mechanism

  • [protein|53BA24E91EEC797C95B8975C487F3C50CBBFA2E3|LytT]: activation, [Pubmed|28974613,27422364], in [regulon|53BA24E91EEC797C95B8975C487F3C50CBBFA2E3|LytT regulon]
  • [protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA]: repression, ([Pubmed|28974613,27422364], in [regulon|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA regulon]
  • [protein|65E2F7197D46F5C884CC96018EE4F3EEE94FFA18|Kre]: repression, in [regulon|65E2F7197D46F5C884CC96018EE4F3EEE94FFA18|Kre regulon]

    • regulation

  • induced by acetate [Pubmed|26060272]
  • induced by pyruvate ([protein|53BA24E91EEC797C95B8975C487F3C50CBBFA2E3|LytT]) [pubmed|28974613]
  • subject to carbon catabolite repression ([protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA]) [pubmed|28974613]

    • additional information

  • the [gene|6F21B5E9EEF67E96808A1DEFA3A80DA2A0FF9462|pftA]-[gene|F6C3B267106E7510FABECF0B13ABF222901689A9|pftB] operon is strongly upregulated in a ''[SW|kre]'' mutant [Pubmed|26110430]
  • the [gene|6F21B5E9EEF67E96808A1DEFA3A80DA2A0FF9462|pftA]-[gene|F6C3B267106E7510FABECF0B13ABF222901689A9|pftB] operon is strongly upregulated in a ''[SW|cshA]'' mutant [Pubmed|23175651]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B013 (ysbA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1012 NBRP B. subtilis, Japan]
  • GP1554 (Δ''[gene|6F21B5E9EEF67E96808A1DEFA3A80DA2A0FF9462|pftA]-[gene|F6C3B267106E7510FABECF0B13ABF222901689A9|pftB]''::''spc''), available in [SW|Jörg Stülke]'s lab

    • References

    Reviews

  • 27511628

    • Original publications

  • 26060272,23175651,21815947,15659658,17452642,26110430,27422364