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yhaM [Tue Dec 13 2016 11:16:31 GMT+0100 (CET)]
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yhaM [Tue Dec 13 2016 11:16:31 GMT+0100 (CET)]

RNase, 3-> 5 exoribonuclease
locus
BSU09930
pI
5.00
mw
35.00 kDa
function
RNA degradation
product
RNase YhaM
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.2|RNA synthesis and degradation] → [category|SW 3.2.4|RNases] → [category|SW 3.2.4.1|Exoribonucleases]

    • [SW|Categories] containing this gene/protein

  • [SW|RNAses]

    • This gene is a member of the following [SW|regulons]

  • [SW|LexA regulon]

    • Gene

    Coordinates on the chromosome (coding sequence)
    1,069,042 -> 1,069,986

    The protein

    Catalyzed reaction/ biological activity

  • 3'-5' exoribonuclease

    • Protein family

  • OB DNA-binding domain (according to Swiss-Prot)

    • [SW|Localization]

  • cytoplasm (Homogeneous) [Pubmed|16479537]

    • Additional information

  • subject to Clp-dependent proteolysis upon glucose starvation [Pubmed|17981983]

    • Expression and Regulation

    Operon

  • ''[protein|search|yhaO]-[protein|search|sbcE]-[protein|search|yhaM]'' [Pubmed|16267290]

    • Regulation

  • induced by DNA damage ([protein|search|LexA]) [Pubmed|16267290]
  • putatively regulated by [protein|search|CcpN] [Pubmed|19732150]

    • Regulatory mechanism

  • [protein|search|LexA]: transcription repression [Pubmed|16267290]

    • Additional information

  • subject to Clp-dependent proteolysis upon glucose starvation [PubMed|17981983]

    • Labs working on this gene/protein

  • [SW|David Bechhofer], Mount Sinai School, New York, USA [http://www.mountsinai.org/Research/Centers Laboratories and Programs/Bechhofer Laboratory?citype=Physician&ciid=Bechhofer David H 1255565 Homepage]

    • References

  • 19732150,12399495,19553197,16267290,16479537,17981983,15805522,19880604