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yobQ [2019-01-02 15:30:27]
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yobQ [2019-01-02 15:30:27]

similar to transcription factor ([SW|AraC family])
locus
BSU19050
pI
8.48
mw
28.11 kDa
protein length
241 aa Sequence Blast
gene length
723 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    2,079,611 → 2,080,336

    The protein

    Protein family

  • [SW|AraC family]

    • [SW|Localization]

  • cytoplasm (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|EDD0C5732E487A7F94684289F59B9130773316C1|yobT]-[gene|BB122C73972ACEA08DE97F95FC9AC249671C86A3|yobS]-[gene|6D9AAA63C4E43D2F80C7A2104BDF4D98A21C3B78|yobR]-[gene|6C67AD722D59671ED7589949690773732A8B845F|yobQ]-[gene|DA4A64BDF322EDE9EECE83AC9D4AAA01D3F16720|csaA]
    description
    [pubmed|22383849]
    view in new tab

    genes
    [gene|6D9AAA63C4E43D2F80C7A2104BDF4D98A21C3B78|yobR]-[gene|6C67AD722D59671ED7589949690773732A8B845F|yobQ]-[gene|DA4A64BDF322EDE9EECE83AC9D4AAA01D3F16720|csaA]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A313 (yobQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/313 NBRP B. subtilis, Japan]
  • BKE19050 (Δ[gene|6C67AD722D59671ED7589949690773732A8B845F|yobQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19050 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGCAAACCCCTTCCTT, downstream forward: _UP4_TGATGGCTCTTTAGTTAAAA
  • BKK19050 (Δ[gene|6C67AD722D59671ED7589949690773732A8B845F|yobQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19050 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGCAAACCCCTTCCTT, downstream forward: _UP4_TGATGGCTCTTTAGTTAAAA

    • References

  • 23504016