yobQ

similar to transcription factor ([SW|AraC family])

locus: BSU_19050

pI: 8.48

mw: 28.11 kDa

protein length: 241 aa

gene length: 726 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates: 2,079,611 2,080,336

The protein

Protein family

• [SW|AraC family]

[SW|Domains]

• [SW|cupin 2 domain] (aa 22 ... 78)
• [SW|HTH araC/xylS-type domain] (aa 137-235) (according to UniProt)

[SW|Localization]

• cytoplasm (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|EDD0C5732E487A7F94684289F59B9130773316C1|yobT]-[gene|BB122C73972ACEA08DE97F95FC9AC249671C86A3|yobS]-[gene|6D9AAA63C4E43D2F80C7A2104BDF4D98A21C3B78|yobR]-[gene|6C67AD722D59671ED7589949690773732A8B845F|yobQ]-[gene|DA4A64BDF322EDE9EECE83AC9D4AAA01D3F16720|csaA]
  description: [pubmed|22383849]

• genes: [gene|6D9AAA63C4E43D2F80C7A2104BDF4D98A21C3B78|yobR]-[gene|6C67AD722D59671ED7589949690773732A8B845F|yobQ]-[gene|DA4A64BDF322EDE9EECE83AC9D4AAA01D3F16720|csaA]
  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-A313 (yobQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/313 NBRP B. subtilis, Japan]
• BKE19050 ([gene|6C67AD722D59671ED7589949690773732A8B845F|yobQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19050 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGCAAACCCCTTCCTT, downstream forward: _UP4_TGATGGCTCTTTAGTTAAAA
• BKK19050 ([gene|6C67AD722D59671ED7589949690773732A8B845F|yobQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19050 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGCAAACCCCTTCCTT, downstream forward: _UP4_TGATGGCTCTTTAGTTAAAA

References

• 23504016