ypqA [2018-11-16 16:48:26]

unknown

locus: BSU22240

pI: 5.04

mw: 16.18 kDa

protein length: 139 aa

gene length: 417 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]

Gene

Coordinates: 2,337,577 → 2,337,996

The protein

[SW|Localization]

• cytoplasm (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|6C4B332D3532FD1B5DBF94CEBE55075AAEADB8AB|ypqA]
  description: [Pubmed|22383849]

  sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|15383836], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]
  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|15699190,15383836], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]

  regulation

  • expressed during sporulation in the mother cell ([protein|search|SigE], [protein|search|SigK]) [Pubmed|15699190,15383836]

Biological materials

Mutant

• MGNA-A471 (ypqA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/471 NBRP B. subtilis, Japan]
• BKE22240 (Δ[gene|6C4B332D3532FD1B5DBF94CEBE55075AAEADB8AB|ypqA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE22240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATATCGCCACCGCCTTTT, downstream forward: _UP4_TGAACGATTCATTCATGCTT
• BKK22240 (Δ[gene|6C4B332D3532FD1B5DBF94CEBE55075AAEADB8AB|ypqA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK22240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATATCGCCACCGCCTTTT, downstream forward: _UP4_TGAACGATTCATTCATGCTT

References

• 15699190,15383836