yozM [2019-07-02 11:35:04]

unknown

locus: BSU18960

pI: 5.35

mw: 12.85 kDa

protein length: 111 aa

gene length: 336 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 2,065,042 2,065,377

The protein

Protein family

• phr family (according to Swiss-Prot)

Effectors of protein activity

• * [SW|Interactions]

Expression and Regulation

Operons

• genes: [gene|6C3261E009BA8A386055323CA24DFE9D7AF76AE6|yozM]
  description: [Pubmed|16267290]

  regulatory mechanism

  • [protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA]: repression, [Pubmed|12850135], in [regulon|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA regulon]
  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|16267290], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

  regulation

  • induced by DNA damage ([protein|search|LexA]) [Pubmed|16267290]

Biological materials

Mutant

• MGNA-B410 (yozM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1409 NBRP B. subtilis, Japan]
• BKE18960 ([gene|6C3261E009BA8A386055323CA24DFE9D7AF76AE6|yozM]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18960 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCACCATCACACTCTCC, downstream forward: _UP4_TAAAACGCCCAGCAATTAAA
• BKK18960 ([gene|6C3261E009BA8A386055323CA24DFE9D7AF76AE6|yozM]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18960 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCACCATCACACTCTCC, downstream forward: _UP4_TAAAACGCCCAGCAATTAAA

References

• 16267290,12850135