SubtiBank SubtiBank
spoVK
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spoVK

required for spore maturation
locus
BSU_17420
pI
8.82
mw
36.52 kDa
protein length
322 aa Sequence Blast
gene length
969 bp Sequence Blast
function
spore maturation
product
unknown
essential
no
synonyms
spoVJ
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]

    • Gene

    Coordinates
    1,874,203 1,875,171

    The protein

    Protein family

  • cbxX/cfxQ family (single member, according to UniProt)

    • Structure

  • [PDB|3ZUH] (from Rhodobacter sphaeroides, 41% identity) [pubmed|22048315]

    • Expression and Regulation

    Operons

    genes
    [gene|69D4685E435B472A3E87E312ECA77553631687E4|spoVK]
    description
    [Pubmed|1787791]

    sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|15699190,1787791], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]
  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|1787791], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]

    • regulatory mechanism

  • [protein|90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|SpoIIID]: activation, [Pubmed|15383836], in [regulon|90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|SpoIIID regulon]

    • regulation

  • expressed during sporulation in the mother cell ([protein|search|SigE], [protein|search|SigK]) [Pubmed|15699190,1787791]
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    Biological materials

    Mutant

  • 1S99 ( ''spoVK''::''erm''), [Pubmed|1732196], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1S99&Search=1S99 BGSC]
  • BKE17420 ([gene|69D4685E435B472A3E87E312ECA77553631687E4|spoVK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE17420 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTCACCTCTCTGTTCT, downstream forward: _UP4_TAGACCTCTCAGTTTTTGAG
  • BKK17420 ([gene|69D4685E435B472A3E87E312ECA77553631687E4|spoVK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK17420 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTCACCTCTCTGTTCT, downstream forward: _UP4_TAGACCTCTCAGTTTTTGAG

    • References

  • 1787791,1732196,2514336,15383836,22048315