SubtiBank SubtiBank
yvkB [2019-02-22 16:00:30]
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yvkB [2019-02-22 16:00:30]

similar to transcriptional regulator (TetR family)
locus
BSU35200
pI
6.82
mw
21.39 kDa
protein length
189 aa Sequence Blast
gene length
570 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    3,618,364 3,618,933

    The protein

    Protein family

  • [SW|TetR family]

    • Expression and Regulation

    Operons

    genes
    [gene|7235F9D0048961BBD93FA6A4322018029A607435|yvkC]-[gene|672EAC84789910ADB2C2A449910BEECA39A9A2B1|yvkB]-[gene|F4028F82CCF1A0335D1ABF823645A36D9072F17F|yvkA]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A343 (yvkB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/343 NBRP B. subtilis, Japan]
  • BKE35200 ([gene|672EAC84789910ADB2C2A449910BEECA39A9A2B1|yvkB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE35200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATACGTTTCACCTCACGA, downstream forward: _UP4_TAACTCCTTGGCATAATAAA
  • BKK35200 ([gene|672EAC84789910ADB2C2A449910BEECA39A9A2B1|yvkB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK35200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATACGTTTCACCTCACGA, downstream forward: _UP4_TAACTCCTTGGCATAATAAA

    • References

    Reviews

  • 24006471

    • Original publications